Full Blast 4 Students Book Download ((NEW))
Full Blast 4 Students Book Download
the blast + package itself can be further customized by changing the fasta database file (which usually is called blostdb.fna) and the associated fasta2 search database (blostdb.f2a). these two files will be stored at ~/.blastdb and ~/.blast2, respectively. the blast + package configuration file (blastdb.cfg) will be stored at ~/.blast2/blastdb.cfg. the blast + package is created using the same command-line interface as described above, replacing the /usr/bin/blast+ with the path to the blast + executable.
blast searches are performed at the command line. the program can also be executed using a script or a perl application. instructions on running blast using shell scripts or perl modules are available online in the blast+ user manual:, familiarity with compilers is assumed. questions and feedback on source code compilation should be addressed to:
the source code archive, ncbi-blast-#.#.#+-src in either zip or gziped tar format, is available from the same latest ftp directory. instructions on compilation are available online in the blast+ user manual:, familiarity with compilers is assumed. questions and feedback on source code compilation should be addressed to:
an idt programmer can access the blast+ program through a command line interface (cli) or a perl application. for the cli, the blast+ executable (blast+), as well as the blast+ configuration file (blastdb.cfg), are placed in a special directory, ~/blast2, and the blast+ program is called using the $blastdir/blast+ command. for the perl application, the blast+ executable is placed in a special directory, ~/blast2/bin/blast+, and the blast+ program is called using the $blastdir/bin/blast+ command. the script below demonstrates the usage of the cli.
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